Basic Information
Locus ID:
BniB06g016170.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CIPK3
Description:
CBL-interacting serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 8374143 | 8376891 | - | BniB06g016170.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 49,606.39 Da | 36.81 | 83.28 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 309 | 418 | 7.04561E-43 | - |
| Pfam | PF03822 | NAF domain | 305 | 364 | 9.6E-18 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 10 | 265 | 1.2E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 277 | 1.35E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 89 | 1.6E-32 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 302 | 427 | 4.7E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 272 | 6.3E-59 | - |
| SMART | SM00220 | serkin_6 | 10 | 265 | 4.7E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 265 | 49.799042 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 303 | 327 | 12.128263 | IPR018451 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 16 | 39 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_018436670.1 | PREDICTED: CBL-interacting serine/threonine-protein kinase 3 [Raphanus sativus] | 0 |
| Q2V452 | CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CIPK3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WDH2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_010060 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology