halophFGD

Basic Information

Locus ID: BniB06g016070.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Regulatory protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B6	8341074	8341511	+	BniB06g016070.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.90	15,736.86 Da	38.43	110.34	0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00651	BTB/POZ domain	58	96	8.4E-6	IPR000210
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	34	131	5.8E-9	IPR011333
ProSiteProfiles	PS50097	BTB domain profile.	60	127	9.826996	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14508 (regulatory protein NPR1)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G26120.1	Ankyrin repeat family protein / BTB/POZ domain-containing protein.
RefSeq	XP_018472236.1	PREDICTED: regulatory protein NPR2 isoform X2 [Raphanus sativus]
Swiss-Prot	Q9SZI3	Regulatory protein NPR2 OS=Arabidopsis thaliana OX=3702 GN=NPR2 PE=1 SV=1
TrEMBL	A0A8X7WD77	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_010054 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Brassica nigra	1	BniB06g016070.2N
Portulacaceae	Portulaca oleracea	1	evm.TU.LG25.612