Basic Information
Locus ID:
BniB06g012560.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 6363783 | 6365174 | - | BniB06g012560.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 51,145.75 Da | 51.41 | 69.98 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 77 | 131 | 3.725E-7 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 77 | 139 | 1.3E-11 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 72 | 141 | 2.62E-12 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 66 | 166 | 2.7E-13 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 76 | 134 | 3.9E-6 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 77 | 142 | 11.867838 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 399 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_013629301.1 | PREDICTED: uncharacterized protein LOC106335347 [Brassica oleracea var. oleracea] | 0 |
| P0DO01 | Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DJA7A PE=1 SV=1 | 0 | |
| TrEMBL | A0A816IIG9 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C03P61920.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology