Basic Information
Locus ID:
BniB06g011640.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 5924797 | 5926417 | - | BniB06g011640.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 41,271.80 Da | 61.65 | 89.09 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 129 | 172 | 1.72341E-5 | - |
| Pfam | PF00651 | BTB/POZ domain | 25 | 122 | 9.6E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 211 | 300 | 9.5E-10 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 25 | 157 | 1.31E-11 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 202 | 305 | 6.93E-19 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 201 | 311 | 7.8E-14 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 128 | 200 | 2.1E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 13 | 123 | 3.9E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 25 | 160 | 4.6E-8 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 204 | 301 | 9.2E-16 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 96 | 10.530184 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_013642938.2 | BTB/POZ and TAZ domain-containing protein 1 [Brassica napus] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WAF4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_009727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology