Basic Information
Locus ID:
BniB06g010510.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 5336246 | 5341638 | + | BniB06g010510.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 106,702.96 Da | 27.45 | 106.84 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 114 | 173 | 7.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 425 | 484 | 3.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 645 | 906 | 6.6E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 61 | 1.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 301 | 558 | 3.23E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 910 | 1.11E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 317 | 1.09E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 568 | 2.1E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 184 | 1.8E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 274 | 2.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 603 | 718 | 1.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 719 | 930 | 3.7E-60 | - |
| SMART | SM00220 | serkin_6 | 643 | 917 | 4.4E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 112 | 7.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 208 | 232 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 423 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 350 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 470 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 380.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 643 | 914 | 35.368229 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 649 | 671 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 765 | 777 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 955 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 946 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62230.1 | ERECTA-like 1. Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. | 0 |
| RefSeq | XP_013621795.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| C0LGW6 | LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana OX=3702 GN=ERL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6B5R2 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC3T18722H PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 5 | jg14068, jg23990, jg4602, jg7950, jg7951 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8054 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034440 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g033750 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20415, Sbi_jg23364 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17147 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009075 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl63595, Sgl68082 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016861, gene:ENSEOMG00000022156 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0013550, CQ.Regalona.r1.2BG0015610 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30181640, pistato.v30260850 |
| Apiaceae | Apium graveolens | 4 | Ag2G01558, Ag2G01938, Ag7G00418, Ag9G02574 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G004100, COCNU_08G006160 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103704912, gene-LOC103721746 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.1302.V1.1, AsparagusV1_03.1303.V1.1 ... |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G21699, Ftri1G09595, Ftri3G24629 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT2G26330.1, AT5G07180.1, AT5G62230.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10001898m.g.v1.0, Thhalv10003615m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g25430.v2.2, Sp4g06960.v2.2, Sp6g35720.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g024810.2N, BniB02g053710.2N, BniB06g010510.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G2029, Ceq03G2152 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G2101, Cgl03G2294 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno09g01110, gene.Cymno18g04630 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g05590, gene.Thate05g25620 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.2262, evm.TU.LG07.694 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013390, Pov_00040854 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G04460, Lb1G07869, Lb2G12716, Lb4G25723 |
| Poaceae | Echinochloa crus-galli | 9 | AH06.497, AH06.682, AH07.3673, BH06.187, BH06.756, BH07.3483 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_2AG0147880, gene-QOZ80_2BG0203290 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.6HG0620170.1, HORVU.MOREX.r3.7HG0644570.1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_025829, gene-QYE76_027423, gene-QYE76_027630 |
| Poaceae | Oryza coarctata | 6 | Oco03G023250, Oco04G023830, Oco11G001430, Oco11G004670 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g53720.1, LOC_Os06g03970.1, LOC_Os06g10230.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G295600, gene-BS78_10G022700 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0203053, Pt_Chr0304993, Pt_Chr0405065, Pt_Ctg00141 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G000840, Chr11G020700, Chr11G023880, Chr15G002120 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel6E01G593400, Tel7E01G139500, Tel7E01G326500 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC4AG062720, gene_TRIDC6AG050310 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS4A02G422700.1, TraesCS6A02G336300.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb256740_P004, Zm00001eb278640_P001 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-34988, nbis-gene-40011, nbis-gene-40299 ... |
| Poaceae | Zoysia macrostachya | 5 | Zma_g17273, Zma_g29034, Zma_g29298, Zma_g31281, Zma_g31537 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.846, evm.TU.LG15.88 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc07g02910, gene.Posoc08g04520 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_10_RagTag.654, evm.TU.Scaffold_4_RagTag.1093 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12606, nbisL1-mrna-25861 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-15597, nbisL1-mrna-18568, nbisL1-mrna-7054 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-12871, nbisL1-mrna-12872, nbisL1-mrna-1338 ... |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000008l.700, evm.TU.utg000010l.326 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000131, Maker00008771, Maker00015066 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-18292, nbisL1-mrna-2052, nbisL1-mrna-540 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-8056, nbisL1-mrna-8944, nbisL1-mrna-9406 |
| Salicaceae | Populus euphratica | 5 | populus_peu04947, populus_peu04948, populus_peu29180 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132631775, gene-LOC132635992 |
| Solanaceae | Solanum chilense | 2 | SOLCI004318000, SOLCI006698600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107014834, gene-LOC107028570 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_13363, gene_5183 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G1946, TC11G1493 |
| Zosteraceae | Zostera marina | 4 | Zosma01g09160.v3.1, Zosma02g09020.v3.1, Zosma03g25670.v3.1 ... |