Basic Information
Locus ID:
BniB06g008160.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 4053223 | 4055474 | - | BniB06g008160.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 48,223.92 Da | 58.38 | 60.70 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 240 | 323 | 1.6E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 419 | - | - |
| Coils | Coil | Coil | 255 | 282 | - | - |
| Coils | Coil | Coil | 367 | 394 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_013742631.1 | protein WVD2-like 4 [Brassica napus] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8B6U9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_009392 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology