Basic Information
Locus ID:
BniB06g005840.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
pect1 pect1 (phosphorylethanolamine cytidylyltransferase 1)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 2909782 | 2912674 | - | BniB06g005840.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 47,023.29 Da | 39.14 | 88.67 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02173 | ECT | 254 | 406 | 4.71363E-86 | - |
| CDD | cd02174 | CCT | 54 | 196 | 2.43037E-83 | IPR041723 |
| Pfam | PF01467 | Cytidylyltransferase-like | 59 | 187 | 7.7E-27 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 259 | 357 | 1.1E-16 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 256 | 391 | 4.41E-25 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 57 | 190 | 2.25E-29 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 225 | 419 | 5.8E-57 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 47 | 218 | 4.6E-57 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 57 | 122 | 2.1E-20 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 257 | 324 | 2.2E-18 | IPR004821 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_013703396.1 | ethanolamine-phosphate cytidylyltransferase [Brassica napus] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816JEY9 | ethanolamine-phosphate cytidylyltransferase OS=Brassica napus OX=3708 GN=DARMORV10_C04P08900.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology