Basic Information
Locus ID:
BniB06g005610.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 2780473 | 2782344 | - | BniB06g005610.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 48,098.58 Da | 35.59 | 86.05 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 116 | 371 | 1.41909E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 91 | 365 | 4.2E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 369 | 3.2E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 172 | 381 | 8.1E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 171 | 5.1E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 371 | 40.046581 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 120 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009143340.2 | serine/threonine-protein kinase PCRK1-like isoform X2 [Brassica rapa] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3BQP2 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106340456 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology