Basic Information
Locus ID:
BniB06g004700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 2309214 | 2311518 | + | BniB06g004700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 67,191.79 Da | 52.94 | 84.99 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14133 | PKc_DYRK_like | 279 | 581 | 2.77014E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 281 | 581 | 9.3E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 269 | 583 | 6.34E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 333 | 581 | 3.3E-95 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 360 | 3.3E-95 | - |
| SMART | SM00220 | serkin_6 | 279 | 581 | 6.3E-70 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 279 | 581 | 36.937103 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| Coils | Coil | Coil | 191 | 221 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40120.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018433317.1 | PREDICTED: serine/threonine-protein kinase ppk15-like isoform X1 [Raphanus sativus] | 0 |
| Q9P6P3 | Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ppk15 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8B6J9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_009047 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology