Basic Information
Locus ID:
BniB06g002630.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 1255679 | 1256923 | + | BniB06g002630.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 45,486.73 Da | 62.71 | 69.20 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 140 | 188 | 7.1E-5 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 192 | 237 | 1.0E-11 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 60 | 7.46E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 115 | 401 | 2.22E-34 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 110 | 400 | 2.6E-32 | IPR015915 |
| SMART | SM00612 | kelc_smart | 204 | 251 | 2.4E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 150 | 202 | 0.28 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_013637158.1 | PREDICTED: F-box/kelch-repeat protein At2g44130-like [Brassica oleracea var. oleracea] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7WC78 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008918 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology