Basic Information
Locus ID:
BniB05g074730.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Contains the following InterPro domains UspA (InterPro IPR006016), Serine threonine-protein kinase domain (InterPro IPR002290), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine-protein kinase, active site (InterPro IPR008271), Protein kinase-like domain (InterPro IPR011009), Rossmann-like alpha beta alpha sandwich fold (InterPro IPR014729), Protein kinase, catalytic domain (InterPro IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro IPR020635)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 67576047 | 67579461 | - | BniB05g074730.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 85,096.72 Da | 58.40 | 75.64 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 458 | 717 | 1.49428E-85 | - |
| CDD | cd01989 | STK_N | 16 | 159 | 1.89471E-56 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 706 | 3.4E-40 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 17 | 148 | 6.2E-13 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 432 | 706 | 2.05E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 156 | 1.76E-11 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 156 | 1.4E-12 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 422 | 524 | 1.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 525 | 725 | 1.5E-49 | - |
| SMART | SM00220 | serkin_6 | 452 | 714 | 1.9E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 714 | 35.73571 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 570 | 582 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 291 | - | - |
| Coils | Coil | Coil | 385 | 414 | - | - |
| Coils | Coil | Coil | 325 | 345 | - | - |
| Coils | Coil | Coil | 353 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_006389938.1 | U-box domain-containing protein 35 [Eutrema salsugineum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | V4K886 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018168mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology