Basic Information
Locus ID:
BniB05g073490.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 66756773 | 66759779 | - | BniB05g073490.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 78,727.62 Da | 44.56 | 88.91 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 12 | 134 | 1.05646E-6 | - |
| CDD | cd14066 | STKc_IRAK | 366 | 633 | 1.98289E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 364 | 628 | 8.6E-44 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 11 | 139 | 3.9E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 631 | 6.2E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 434 | 3.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 657 | 1.2E-58 | - |
| SMART | SM00220 | serkin_6 | 360 | 631 | 6.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 638 | 37.233917 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 481 | 493 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 388 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 251 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_018471757.1 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Raphanus sativus] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VLN0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_025029 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology