Basic Information
Locus ID:
BniB05g070060.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 64398852 | 64401835 | - | BniB05g070060.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 73,634.16 Da | 55.23 | 79.95 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 299 | 552 | 2.39622E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 298 | 551 | 3.1E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 274 | 552 | 3.1E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 263 | 365 | 1.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 366 | 583 | 9.3E-51 | - |
| SMART | SM00220 | serkin_6 | 293 | 556 | 9.6E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 556 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 411 | 423 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 617 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 171 | - | - |
| Coils | Coil | Coil | 243 | 266 | - | - |
| Coils | Coil | Coil | 217 | 237 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72760.2 | - | 0 |
| RefSeq | XP_013617233.1 | PREDICTED: U-box domain-containing protein 51-like [Brassica oleracea var. oleracea] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A078IKC7 | BnaA02g16130D protein OS=Brassica napus OX=3708 GN=BnaA02g16130D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology