Basic Information
Locus ID:
BniB05g068540.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 63278852 | 63284353 | + | BniB05g068540.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 176,748.73 Da | 48.22 | 74.60 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1296 | 1559 | 8.41536E-152 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 306 | 581 | 9.80112E-132 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1502 | 1557 | 4.2E-7 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 331 | 570 | 2.2E-33 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1335 | 1501 | 1.3E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 375 | 547 | 4.45E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1263 | 1559 | 1.7E-83 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1417 | 1560 | 4.0E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 374 | 547 | 1.2E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1253 | 1416 | 2.8E-37 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1269 | 1560 | 2.0E-119 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1237 | 1559 | 59.651825 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1023 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1033 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 232 | - | - |
| Coils | Coil | Coil | 948 | 968 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_013690973.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Brassica napus] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VL11 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_024635 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology