Basic Information
Locus ID:
BniB05g067700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 62636036 | 62641702 | - | BniB05g067700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 112,080.16 Da | 29.97 | 92.81 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 697 | 959 | 2.16463E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 692 | 956 | 8.5E-45 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 425 | 610 | 1.2E-43 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 97 | 411 | 3.4E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 665 | 959 | 4.24E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 420 | 1.9E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 202 | 4.9E-24 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 424 | 613 | 1.8E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 766 | 6.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 970 | 3.1E-58 | - |
| SMART | SM00220 | serkin_6 | 691 | 959 | 2.5E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 968 | 36.993637 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | 7.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1022 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1008 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_013676480.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Brassica napus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X8AVX2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_024555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology