Basic Information
Locus ID:
BniB05g067690.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 62600904 | 62615884 | - | BniB05g067690.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 236,558.03 Da | 29.14 | 94.79 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 679 | 947 | 1.62282E-89 | - |
| CDD | cd14066 | STKc_IRAK | 1783 | 2045 | 8.87923E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 674 | 882 | 7.5E-44 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1778 | 1984 | 1.7E-43 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 407 | 592 | 3.1E-43 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 1540 | 1723 | 4.4E-40 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 1222 | 1451 | 1.81E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 365 | 2.72E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1753 | 2045 | 1.33E-77 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 652 | 947 | 1.18E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1155 | 1317 | 4.3E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 397 | 4.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 109 | 5.4E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 200 | 2.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1318 | 1394 | 2.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1395 | 1515 | 1.7E-23 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 1539 | 1724 | 1.0E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1740 | 1852 | 3.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 755 | 959 | 1.2E-56 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 406 | 597 | 1.1E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 646 | 754 | 1.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1853 | 2056 | 9.1E-57 | - |
| SMART | SM00365 | LRR_sd22_2 | 1452 | 1482 | 110.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 78 | 104 | 250.0 | - |
| SMART | SM00220 | serkin_6 | 673 | 947 | 3.3E-28 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 319 | 349 | 13.0 | - |
| SMART | SM00220 | serkin_6 | 1777 | 2045 | 2.3E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 937 | 37.021904 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1777 | 2051 | 36.131462 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1897 | 1909 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 799 | 811 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_048606206.1 | uncharacterized protein LOC106429068 [Brassica napus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0D3APL2 | Non-specific serine/threonine protein kinase OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology