Basic Information
Locus ID:
BniB05g066920.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 61912750 | 61920104 | - | BniB05g066920.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 67,187.78 Da | 51.28 | 64.43 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 234 | 378 | 4.0E-59 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 8.9E-70 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 390 | 523 | 3.4E-66 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 6 | 150 | 1.05E-24 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 239 | 382 | 1.26E-22 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 390 | 526 | 9.81E-24 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 235 | 380 | 1.0E-14 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 392 | 514 | 2.8E-16 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 147 | 7.2E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 571 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69900.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_023644301.1 | uncharacterized protein LOC17895069 [Capsella rubella] | 0 |
| TrEMBL | A0A8X8AUN5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_024497 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology