Basic Information
Locus ID:
BniB05g058460.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 53995084 | 53996161 | + | BniB05g058460.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.26 | 23,133.47 Da | 38.83 | 76.39 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF19026 | HYPK UBA domain | 173 | 212 | 4.6E-14 | IPR044034 |
| Pfam | PF01849 | NAC domain | 69 | 123 | 1.1E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 75 | 128 | 3.6E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 174 | 211 | 1.7E-18 | - |
| SMART | SM01407 | NAC_2 | 69 | 125 | 1.0E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 66 | 131 | 17.645475 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 56 | - | - |
| Coils | Coil | Coil | 8 | 29 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10480.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_018460927.1 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 4 [Raphanus sativus] | 0 |
| Q9SZY1 | Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8AV12 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023894 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology