Basic Information
Locus ID:
BniB05g057340.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 52391805 | 52392263 | + | BniB05g057340.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.20 | 17,884.65 Da | 43.63 | 94.14 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15740.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_018468722.1 | PREDICTED: uncharacterized protein LOC108840391 [Raphanus sativus] | 0 |
| TrEMBL | A0A8X7VJ48 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023813 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G14970.1, AT3G15740.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029392m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g05720.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g057340.2N |