Basic Information
Locus ID:
BniB05g056570.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Contains the following InterPro domains Copper amine oxidase, N-terminal (InterPro IPR016182), Copper amine oxidase, N2-terminal (InterPro IPR015800), Copper amine oxidase, N2 N3-terminal (InterPro IPR015801), Copper amine oxidase, N3-terminal (InterPro IPR015802), Copper amine oxidase (InterPro IPR000269), Copper amine oxidase, C-terminal (InterPro IPR015798)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 51415530 | 51418064 | - | BniB05g056570.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 83,459.74 Da | 39.43 | 78.40 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 84 | 165 | 1.1E-24 | IPR015800 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 301 | 725 | 1.1E-138 | IPR015798 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 177 | 276 | 2.4E-29 | IPR015802 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 294 | 730 | 6.15E-153 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 82 | 164 | 7.85E-18 | IPR016182 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 175 | 284 | 2.16E-32 | IPR016182 |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 272 | 740 | 5.9E-159 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 178 | 271 | 1.7E-26 | - |
| Gene3D | G3DSA:3.10.450.40 | - | 83 | 177 | 1.9E-17 | - |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 687 | 700 | - | IPR000269 |
| ProSitePatterns | PS01164 | Copper amine oxidase topaquinone signature. | 457 | 470 | - | IPR000269 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 82 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12290.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_048612697.1 | primary amine oxidase-like [Brassica napus] | 0 |
| Q8H1H9 | Amine oxidase [copper-containing] gamma 1 OS=Arabidopsis thaliana OX=3702 GN=CuAOgamma1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VIE2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023755 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology