Basic Information
Locus ID:
BniB05g047040.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 26912936 | 26915431 | - | BniB05g047040.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 64,793.41 Da | 49.06 | 82.38 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 125 | 387 | 7.32366E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 126 | 388 | 2.6E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 416 | 570 | 1.46E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 124 | 423 | 1.48E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 406 | 497 | 2.6E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 413 | 567 | 2.6E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 216 | 404 | 2.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 119 | 215 | 2.1E-22 | - |
| SMART | SM00220 | serkin_6 | 126 | 388 | 2.6E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 388 | 51.38205 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 132 | 158 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_009101966.1 | CDPK-related kinase 5 isoform X2 [Brassica rapa] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8AUA2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology