Basic Information
Locus ID:
BniB05g045270.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 25257083 | 25258959 | - | BniB05g045270.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 53,533.81 Da | 45.80 | 85.58 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 170 | 436 | 8.62116E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 165 | 431 | 6.1E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 438 | 2.43E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 145 | 239 | 5.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 240 | 451 | 4.8E-63 | - |
| SMART | SM00220 | serkin_6 | 164 | 435 | 5.1E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 164 | 441 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 286 | 298 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 170 | 193 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 477 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009126257.2 | probable receptor-like protein kinase At5g18500 [Brassica rapa] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VHZ9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023331 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology