Basic Information
Locus ID:
BniB05g044880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 25073640 | 25076284 | + | BniB05g044880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 57,460.89 Da | 41.81 | 81.91 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 197 | 458 | 3.6E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 458 | 5.19E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 270 | 482 | 8.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 163 | 267 | 1.1E-24 | - |
| SMART | SM00220 | serkin_6 | 193 | 457 | 1.5E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 193 | 465 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 199 | 222 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 312 | 324 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 115 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009126290.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Brassica rapa] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VHP2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_023350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology