Basic Information
Locus ID:
BniB05g042850.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
npr1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 23521399 | 23521626 | - | BniB05g042850.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 8,360.64 Da | 34.16 | 102.80 | 0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19660.1 | NPR1-like protein 4. Encodes a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways. | 0 |
| RefSeq | NP_193701.2 | NPR1-like protein 4 [Arabidopsis thaliana] | 0 |
| Q5ICL9 | Regulatory protein NPR4 OS=Arabidopsis thaliana OX=3702 GN=NPR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7PZ69 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068098 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G01645 |
| Brassicaceae | Brassica nigra | 5 | BniB02g071280.2N, BniB03g042370.2N, BniB05g042850.2N ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-55826 |