Basic Information
Locus ID:
BniB05g041320.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 22413481 | 22415450 | + | BniB05g041320.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 60,431.57 Da | 40.13 | 69.06 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 463 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 295 | 463 | 2.8E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 38 | 178 | 4.5E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 471 | 4.35E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 464 | 3.1E-81 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 120 | 2.9E-40 | - |
| SMART | SM00220 | serkin_6 | 38 | 463 | 5.2E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 463 | 30.633337 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 293 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22840.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013679919.2 | SRSF protein kinase 1 [Brassica napus] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VH70 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_022685 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology