Basic Information
Locus ID:
BniB05g040380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 21724824 | 21730015 | - | BniB05g040380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 89,277.14 Da | 39.06 | 87.09 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 495 | 709 | 7.4E-39 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 110 | 325 | 3.6E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 773 | 4.86E-63 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 392 | 6.74E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 86 | 183 | 2.5E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 568 | 1.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 420 | 2.4E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 569 | 785 | 1.0E-44 | - |
| SMART | SM00220 | serkin_6 | 492 | 776 | 7.3E-23 | IPR000719 |
| SMART | SM00220 | serkin_6 | 107 | 394 | 4.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 492 | 776 | 32.753437 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 400 | 32.216347 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 621 | 633 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 239 | 251 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60090.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013616922.1 | PREDICTED: probable receptor-like protein kinase At3g55450 [Brassica oleracea var. oleracea] | 0 |
| P46573 | Probable serine/threonine-protein kinase PBL10 OS=Arabidopsis thaliana OX=3702 GN=PBL10 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3P6DJ81 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC2T07287H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G60080.1, AT5G60090.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10009373m.g.v1.0, Thhalv10013099m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g21740.v2.2, Sp6g21750.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB02g039790.2N, BniB02g039820.2N, BniB05g040380.2N ... |