Basic Information
Locus ID:
BniB05g038400.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
serine threonine-protein kinase At5g41260
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 20352153 | 20354443 | - | BniB05g038400.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 54,687.55 Da | 38.67 | 80.63 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 69 | 306 | 3.8E-25 | IPR001245 |
| SUPERFAMILY | SSF48452 | TPR-like | 383 | 486 | 5.0E-14 | IPR011990 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 313 | 7.97E-43 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 27 | 130 | 7.9E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 323 | 9.6E-43 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 380 | 489 | 1.5E-14 | IPR011990 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 310 | 20.527527 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59010.1 | Protein kinase protein with tetratricopeptide repeat domain. | 0 |
| RefSeq | XP_013616407.1 | PREDICTED: probable serine/threonine-protein kinase At5g41260 [Brassica oleracea var. oleracea] | 0 |
| Q9FIL1 | Serine/threonine-protein kinase BSK5 OS=Arabidopsis thaliana OX=3702 GN=BSK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VGB8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_022467 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology