Basic Information
Locus ID:
BniB05g038370.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 20336615 | 20338365 | - | BniB05g038370.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 57,291.95 Da | 48.51 | 75.34 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 194 | 443 | 1.08787E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 194 | 443 | 1.6E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 443 | 7.15E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 176 | 270 | 2.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 271 | 477 | 7.5E-62 | - |
| SMART | SM00220 | serkin_6 | 187 | 446 | 2.4E-55 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 5 | 97 | 380.0 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 269 | 477 | 5.3E-30 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 232 | 286 | 6.7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 187 | 447 | 42.760311 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 311 | 323 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 370 | 392 | 3.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 414 | 436 | 3.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 305 | 323 | 3.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 267 | 280 | 3.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 351 | 361 | 3.7E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018469409.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Raphanus sativus] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VGD8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_022461 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology