Basic Information
Locus ID:
BniB05g035660.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
HSP81-3
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 18500322 | 18502103 | + | BniB05g035660.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 68,233.68 Da | 38.77 | 81.03 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 79 | 584 | 1.4E-235 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 436 | 557 | 1.24E-37 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 2 | 108 | 2.36E-32 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 157 | 412 | 5.69E-108 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 125 | 9.9E-46 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 412 | 561 | 1.2E-65 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 325 | 411 | 9.3E-41 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 156 | 324 | 7.8E-85 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 593 | 1.1E-206 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 83 | 101 | 2.8E-33 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 65 | 82 | 2.8E-33 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 13 | 35 | 2.8E-33 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 593 | - | - |
| Coils | Coil | Coil | 416 | 436 | - | - |
| Coils | Coil | Coil | 116 | 143 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_013685511.2 | heat shock protein 90-2-like [Brassica napus] | 0 |
| P55737 | Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VG64 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_022233 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology