halophFGD

Basic Information

Locus ID: BniB05g034970.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Short Name: CIPK2

Description: CBL-interacting serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B5	18149902	18150306	+	BniB05g034970.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.44	15,716.80 Da	48.58	72.69	-0.74

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd12195	CIPK_C	4	94	2.43567E-39	-
Pfam	PF03822	NAF domain	6	35	7.8E-9	IPR004041
Gene3D	G3DSA:3.30.310.80	Kinase associated domain 1, KA1	1	101	5.6E-30	-
Coils	Coil	Coil	19	39	-	-

Gene Ontology

Biological Process:

GO:0007165 (signal transduction)

KEGG Pathway

KO Term:

K07198 (5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31])

Pathway:

ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) ko04710 (Circadian rhythm)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G58380.1	SOS3-interacting protein 1. Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.
RefSeq	XP_013618732.1	PREDICTED: CBL-interacting serine/threonine-protein kinase 10-like [Brassica oleracea var. oleracea]
Swiss-Prot	Q9C562	CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CIPK10 PE=1 SV=1
TrEMBL	A0A3P6D4A8	non-specific serine/threonine protein kinase OS=Brassica oleracea OX=3712 GN=BOLC2T07453H PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg23780, jg38045
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000044402
Apiaceae	Apium graveolens	2	Ag4G00083, Ag7G00826
Brassicaceae	Brassica nigra	2	BniB02g006070.2N, BniB05g034970.2N
Plumbaginaceae	Limonium bicolor	1	Lb5G27213
Poaceae	Lolium multiflorum	2	gene-QYE76_051070, gene-QYE76_057146
Poaceae	Zoysia japonica	3	nbis-gene-1641, nbis-gene-1642, nbis-gene-42235
Rhizophoraceae	Kandelia candel	6	add.evm.TU.utg000008l.472, add.evm.TU.utg000009l.222 ... add.evm.TU.utg000015l.142, add.evm.TU.utg000015l.70, add.evm.TU.utg000016l.312, add.evm.TU.utg000027l.138
Salicaceae	Populus euphratica	1	populus_peu25291