Basic Information
Locus ID:
BniB05g032490.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ATP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 16298203 | 16301909 | - | BniB05g032490.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 69,568.41 Da | 49.59 | 92.50 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 493 | 617 | 3.85078E-22 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 495 | 620 | 7.7E-36 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 455 | 620 | 9.27E-43 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 455 | 621 | 2.7E-69 | IPR027417 |
| SMART | SM00382 | AAA_5 | 491 | 624 | 5.7E-18 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 594 | 613 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 219 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_006401767.1 | uncharacterized protein LOC18016424 [Eutrema salsugineum] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7VFC7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_021987 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology