Basic Information
Locus ID:
BniB05g030720.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 15183454 | 15189765 | - | BniB05g030720.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 39,971.41 Da | 49.37 | 78.54 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 127 | 296 | 7.5E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 297 | 6.18E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 117 | 2.3E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 322 | 1.4E-48 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 302 | 25.530964 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 107 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03320.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018453959.1 | PREDICTED: probable receptor-like protein kinase At5g47070 [Raphanus sativus] | 0 |
| Q9LZF8 | Serine/threonine-protein kinase PCRK2 OS=Arabidopsis thaliana OX=3702 GN=PCRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P167 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_096554 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology