Basic Information
Locus ID:
BniB05g028480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 13972910 | 13974510 | + | BniB05g028480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 30,398.01 Da | 83.91 | 68.82 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 145 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07225.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_018465469.1 | PREDICTED: uncharacterized RING finger protein ECU07_0330 [Raphanus sativus] | 0 |
| TrEMBL | A0A8X7VF81 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_021626 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07225.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015609m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35670.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g028480.2N |
| Salicaceae | Populus euphratica | 1 | populus_peu30598 |