Basic Information
Locus ID:
BniB05g018820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 8994624 | 8995333 | + | BniB05g018820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 24,623.88 Da | 37.64 | 88.09 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17565.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_048637931.1 | putative F-box protein At4g17565 [Brassica napus] | 0 |
| Q3EA00 | Putative F-box protein At4g17565 OS=Arabidopsis thaliana OX=3702 GN=At4g17565 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8X7NS07 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_089829 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 36 | AT1G10110.1, AT1G27540.1, AT1G27550.1, AT1G27580.1 ... |
| Brassicaceae | Eutrema salsugineum | 24 | Thhalv10002155m.g.v1.0, Thhalv10003011m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp3g02700.v2.2, Sp3g24140.v2.2, Sp3g33180.v2.2 ... |
| Brassicaceae | Brassica nigra | 32 | BniB01g011090.2N, BniB02g015840.2N, BniB02g015860.2N ... |