Basic Information
Locus ID:
BniB05g017700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 8463250 | 8466438 | - | BniB05g017700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 74,413.13 Da | 47.52 | 88.71 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 384 | 634 | 9.2E-19 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 5.7E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 117 | 138 | 0.25 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 634 | 6.64E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 154 | 4.31E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 177 | 5.6E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 648 | 3.0E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 453 | 1.0E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 638 | 16.683081 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 299 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_018472481.1 | PREDICTED: protein MALE DISCOVERER 2 [Raphanus sativus] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MLW5 | protein MALE DISCOVERER 2 OS=Raphanus sativus OX=3726 GN=LOC108843719 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology