Basic Information
Locus ID:
BniB05g014970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 7079504 | 7082955 | - | BniB05g014970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 76,677.16 Da | 36.03 | 91.54 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 407 | 678 | 3.06078E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.1E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 94 | 108 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 165 | 178 | 0.21 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 675 | 7.6E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 675 | 1.22E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 237 | 1.87E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 253 | 1.6E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 478 | 4.7E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 702 | 3.2E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 678 | 37.785141 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 285 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_009135627.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Brassica rapa] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P5R9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology