halophFGD

Basic Information

Locus ID: BniB05g014920.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Protein of unknown function (DUF295)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B5	7067427	7068545	-	BniB05g014920.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.98	43,287.01 Da	40.27	78.31	-0.33

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	10	50	5.1E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	3	61	1.7E-6	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	10	49	4.6E-6	-
SMART	SM00256	fbox_2	14	54	0.0042	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G22180.1	F-box family protein with a domain of unknown function (DUF295).	0
RefSeq	XP_013659523.2	putative F-box protein At4g22180 [Brassica napus]	0
Swiss-Prot	O49624	Putative F-box protein At4g22180 OS=Arabidopsis thaliana OX=3702 GN=At4g22180 PE=4 SV=3	0
TrEMBL	A0A8X7P634	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093505 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Arabidopsis thaliana	36	AT1G10110.1, AT1G27540.1, AT1G27550.1, AT1G27580.1 ... AT1G67160.1, AT1G69090.1, AT2G03560.1, AT2G03580.1, AT2G03610.1, AT2G04810.1, AT2G04830.1, AT2G04840.1, AT2G05970.1, AT2G14290.1, AT2G14500.1, AT2G24080.1, AT2G33190.1, AT2G33200.1, AT3G03726.1, AT3G03730.1, AT3G22345.1, AT4G10820.1, AT4G12810.1, AT4G12820.1, AT4G14165.1, AT4G17565.1, AT4G22060.1, AT4G22165.1, AT4G22170.1, AT4G22180.1, AT4G22660.1, AT5G14160.1, AT5G25290.1, AT5G25300.1, AT5G38270.1, AT5G66830.1
Brassicaceae	Eutrema salsugineum	24	Thhalv10002155m.g.v1.0, Thhalv10003011m.g.v1.0 ... Thhalv10003406m.g.v1.0, Thhalv10005536m.g.v1.0, Thhalv10005623m.g.v1.0, Thhalv10005703m.g.v1.0, Thhalv10009751m.g.v1.0, Thhalv10009801m.g.v1.0, Thhalv10010442m.g.v1.0, Thhalv10013780m.g.v1.0, Thhalv10013894m.g.v1.0, Thhalv10015550m.g.v1.0, Thhalv10015724m.g.v1.0, Thhalv10017543m.g.v1.0, Thhalv10017659m.g.v1.0, Thhalv10017793m.g.v1.0, Thhalv10022303m.g.v1.0, Thhalv10025429m.g.v1.0, Thhalv10025466m.g.v1.0, Thhalv10026778m.g.v1.0, Thhalv10027445m.g.v1.0, Thhalv10027492m.g.v1.0, Thhalv10028086m.g.v1.0, Thhalv10028141m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp3g02700.v2.2, Sp3g24140.v2.2, Sp3g33180.v2.2 ... Sp4g15490.v2.2
Brassicaceae	Brassica nigra	32	BniB01g011090.2N, BniB02g015840.2N, BniB02g015860.2N ... BniB02g015870.2N, BniB02g079660.2N, BniB02g079670.2N, BniB02g079680.2N, BniB02g079710.2N, BniB04g003420.2N, BniB04g003440.2N, BniB04g020100.2N, BniB04g022220.2N, BniB05g014900.2N, BniB05g014910.2N, BniB05g014920.2N, BniB05g014930.2N, BniB05g018820.2N, BniB05g037380.2N, BniB05g045930.2N, BniB05g075540.2N, BniB06g013440.2N, BniB06g022380.2N, BniB06g022390.2N, BniB06g022410.2N, BniB07g060540.2N, BniB08g005890.2N, BniB08g010430.2N, BniB08g013090.2N, BniB08g013100.2N, BniB08g021060.2N, BniB08g034830.2N, BniB08g034840.2N