Basic Information
Locus ID:
BniB05g014420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 6875650 | 6877992 | - | BniB05g014420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 75,600.56 Da | 40.20 | 97.51 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 5.0E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 678 | 2.0E-32 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 3.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 235 | 3.6E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 680 | 2.2E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 138 | 1.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 492 | 1.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 687 | 1.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 252 | 2.7E-30 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 687 | 26.986765 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018447545.1 | PREDICTED: somatic embryogenesis receptor kinase 4 [Raphanus sativus] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7THI8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_090789 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology