Basic Information
Locus ID:
BniB05g013430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
glucose-6-phosphate 1-epimerase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 6338026 | 6340305 | - | BniB05g013430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 69,006.23 Da | 42.49 | 97.28 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 139 | 197 | 4.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 334 | 596 | 8.0E-35 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 81 | 126 | 8.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 1.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 212 | 1.89E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 599 | 2.19E-57 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 249 | 5.5E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 299 | 405 | 7.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 622 | 1.7E-45 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 163 | 185 | 7.511737 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 613 | 31.552048 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 368 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 628 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23740.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018470324.1 | PREDICTED: probable inactive receptor kinase At4g23740 [Raphanus sativus] | 0 |
| Q9SUQ3 | Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7NVZ0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_090831 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology