Basic Information
Locus ID:
BniB05g012730.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 6001713 | 6006067 | - | BniB05g012730.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 105,566.28 Da | 48.98 | 79.73 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 671 | 919 | 5.64273E-124 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 665 | 919 | 8.9E-64 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 275 | 484 | 6.1E-78 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 644 | 918 | 2.7E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 742 | 7.5E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 744 | 930 | 3.2E-58 | - |
| SMART | SM00220 | serkin_6 | 665 | 923 | 3.2E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 665 | 923 | 42.590702 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 786 | 798 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 671 | 692 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 739 | 752 | 1.6E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 846 | 868 | 1.6E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 890 | 912 | 1.6E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 780 | 798 | 1.6E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 136 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_013739224.2 | serine/threonine-protein kinase CTR1 [Brassica napus] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0U1XJJ9 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=Raf6 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology