Basic Information
Locus ID:
BniB05g012260.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 5819199 | 5820249 | + | BniB05g012260.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 12,852.82 Da | 41.09 | 85.76 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 1.16837E-46 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 116 | 3.1E-42 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 97 | 3.82E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 3.8E-41 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 1.7E-49 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 9.286418 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_020873822.1 | membrane-anchored ubiquitin-fold protein 3 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9SW27 | Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P3N9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093735 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology