Basic Information
Locus ID:
BniB05g010790.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 5215439 | 5217069 | - | BniB05g010790.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 56,426.55 Da | 48.21 | 75.09 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 125 | 482 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 360 | 463 | 1.8E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 127 | 280 | 1.4E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 106 | 496 | 4.81E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 358 | 480 | 1.9E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 124 | 209 | 1.7E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 210 | 280 | 1.7E-51 | - |
| SMART | SM00220 | serkin_6 | 126 | 463 | 4.7E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 463 | 43.410473 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26610.1 | D6 protein kinase like 1. | 0 |
| RefSeq | XP_013600471.1 | PREDICTED: serine/threonine-protein kinase D6PKL1 [Brassica oleracea var. oleracea] | 0 |
| Q9SUA3 | Serine/threonine-protein kinase D6PKL1 OS=Arabidopsis thaliana OX=3702 GN=D6PKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7NR54 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_092147 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology