Basic Information
Locus ID:
BniB05g009020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 4422618 | 4425703 | - | BniB05g009020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 108,843.47 Da | 36.88 | 102.05 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 61 | 4.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 499 | 558 | 4.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 686 | 912 | 3.3E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 2.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 228 | 578 | 2.28E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 306 | 1.59E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 963 | 5.93E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 307 | 621 | 1.7E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 306 | 4.7E-74 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 767 | 3.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 980 | 5.0E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 545 | 568 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 233 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 185 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 967 | 6.0E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 497 | 521 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 967 | 37.021904 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 712 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28490.1 | Leucine-rich receptor-like protein kinase family protein. member of Receptor kinase-like protein family | 0 |
| RefSeq | XP_009129583.2 | receptor-like protein kinase 5 [Brassica rapa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816XP04 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A01P09450.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology