Basic Information
Locus ID:
BniB05g006220.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
MGD1
Description:
synthase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 3141371 | 3143682 | - | BniB05g006220.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 58,043.15 Da | 43.83 | 85.23 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 142 | 519 | 9.28964E-149 | - |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 153 | 321 | 2.0E-62 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 378 | 446 | 3.2E-10 | IPR007235 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 140 | 517 | 7.96E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 331 | 502 | 1.3E-26 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31780.2 | monogalactosyl diacylglycerol synthase 1. Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. | 0 |
| RefSeq | XP_013609520.1 | PREDICTED: monogalactosyldiacylglycerol synthase 1, chloroplastic [Brassica oleracea var. oleracea] | 0 |
| O81770 | Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P4F4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_094932 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology