Basic Information
Locus ID:
BniB05g005740.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
sd2-5 sd2-5 (s-domain-2 5)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 2958199 | 2958555 | - | BniB05g005740.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 13,481.94 Da | 50.88 | 61.86 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 89 | 2.7E-5 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_033135288.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Brassica rapa] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816R6G1 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C01P06650.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB05g005740.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2509 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0386500, gene-QOZ80_7BG0598240 |
| Poaceae | Oryza coarctata | 1 | Oco09G009740 |