Basic Information
Locus ID:
BniB05g005720.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CONTAINS InterPro DOMAIN s Targeting for Xklp2 (InterPro IPR009675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 2935857 | 2937791 | - | BniB05g005720.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 45,809.32 Da | 39.31 | 57.77 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 205 | 286 | 1.3E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 208 | - | - |
| Coils | Coil | Coil | 220 | 250 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_009126143.1 | protein WVD2-like 5 isoform X3 [Brassica rapa] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7TPU1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_089485 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology