Basic Information
Locus ID:
BniB05g005420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 2804764 | 2807350 | - | BniB05g005420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 46,329.64 Da | 48.94 | 79.67 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 57 | 395 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 70 | 395 | 1.3E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 397 | 2.44E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 395 | 2.1E-113 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 150 | 2.1E-113 | - |
| SMART | SM00220 | serkin_6 | 70 | 395 | 1.3E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 395 | 38.774521 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32660.1 | Protein kinase superfamily protein. Encodes protein kinase AME3. | 0 |
| RefSeq | XP_018448798.1 | PREDICTED: serine/threonine-protein kinase AFC3 [Raphanus sativus] | 0 |
| P51568 | Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana OX=3702 GN=AFC3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7TPN8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_089528 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology