Basic Information
Locus ID:
BniB05g004980.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 2600219 | 2604659 | - | BniB05g004980.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 59,917.79 Da | 41.37 | 78.13 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 92 | 466 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 95 | 243 | 5.0E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 294 | 402 | 6.8E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 446 | 4.72E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 431 | 2.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 177 | 8.4E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 297 | 420 | 2.8E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 242 | 8.4E-63 | - |
| SMART | SM00133 | pkinase_C_6 | 403 | 467 | 1.1E-5 | IPR000961 |
| SMART | SM00220 | serkin_6 | 94 | 402 | 7.5E-100 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 403 | 475 | 12.650471 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 94 | 402 | 46.618893 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 100 | 133 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_018468783.1 | PREDICTED: serine/threonine-protein kinase tricorner isoform X1 [Raphanus sativus] | 0 |
| P53894 | Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0M9M5 | serine/threonine-protein kinase tricorner isoform X1 OS=Raphanus sativus OX=3726 GN=LOC108840458 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology