Basic Information
Locus ID:
BniB05g004800.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 2516357 | 2523448 | + | BniB05g004800.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 192,498.88 Da | 46.26 | 74.22 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 34 | 103 | 2.40547E-33 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1437 | 1700 | 3.25637E-144 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 362 | 634 | 1.04486E-135 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1476 | 1641 | 3.8E-33 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 35 | 105 | 4.7E-18 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 385 | 629 | 3.5E-33 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1431 | 1700 | 2.48E-77 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 428 | 600 | 5.76E-42 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 33 | 106 | 5.28E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1560 | 1701 | 4.8E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1389 | 1557 | 7.1E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 110 | 4.8E-21 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 427 | 600 | 1.7E-54 | IPR027409 |
| SMART | SM00064 | fyve_4 | 30 | 107 | 7.5E-21 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1410 | 1701 | 5.0E-142 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 38 | 106 | 13.008968 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1376 | 1700 | 58.04604 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1720 | 1738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1232 | 1251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1178 | 1194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 713 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1135 | 1150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1236 | 1251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1711 | 1738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1126 | 1150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1168 | 1199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 352 | - | - |
| Coils | Coil | Coil | 1038 | 1061 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33240.4 | - | 0 |
| RefSeq | XP_018470430.1 | PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [Raphanus sativus] | 0 |
| Q0WUR5 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A OS=Arabidopsis thaliana OX=3702 GN=FAB1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MD35 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Raphanus sativus OX=3726 GN=LOC108842114 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology