Basic Information
Locus ID:
BniB05g002910.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 1629507 | 1631091 | - | BniB05g002910.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 49,729.31 Da | 40.74 | 80.81 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 419 | 3.62219E-176 | - |
| Pfam | PF00069 | Protein kinase domain | 258 | 419 | 1.5E-23 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 39 | 179 | 1.1E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 422 | 1.68E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 419 | 2.2E-118 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 123 | 2.2E-118 | - |
| SMART | SM00220 | serkin_6 | 38 | 419 | 3.4E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 419 | 34.590858 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| Coils | Coil | Coil | 422 | 442 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013640240.2 | probable serine/threonine-protein kinase sky1 [Brassica napus] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P692 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology